112 Populations Neighbor-Joining/UPGMA method version 3.572c Neighbor-joining method Negative branch lengths allowed +-NFM_RATNFM +-24 +-34 +---NMDA2A_RATNMDA2A ! ! +-40 +--mGluR1_RATGPCGR ! ! +--41 +-----DD63.2_(I_I) ! ! ! ! +-----------NGF_RNNGFB +--49 +-33 ! ! +-----cjun_RNRJG9 ! ! ! +-----cfos_RNCFOSR +-58 ! ! +----------CNTF_RNCNTF ! ! +-42 ! ! +-44 +------------SOD_RNSODR ! ! ! ! ! +-52 +------actin_RNAC01 +-64 ! ! ! +----------EGF_RATEPGF ! ! ! ! +----GFAP_RNU03700 ! ! +-46 ! ! +-48 +-------MOG_RATMOG ! ! ! ! ! +-55 +-------mAChR4_RATACHRMD ! ! ! +--------------PDGFa_RNPDGFACP ! +-77 +-----NFH_RATNFHPEP ! ! +-51 ! ! ! +-GRg1_RNGABA ! ! +-54 ! ! ! ! +--ChAT_(*) ! ! ! ! +-47 ! ! +-57 +-53 +--aFGF_RNHBGF1 ! ! ! ! ! +-96 ! ! ! +----IP3R2_RNITPR2R ! ! ! +-59 ! ! ! ! ! ! +--GRa1_(#) ! ! +-65 ! ! ! ! +----bFGF_RNFGFT ! ! ! ! ! +---S100_beta_RATS100B +-105 ! ! ! ! +--ACHE_S50879 ! ! +-80 ! ! +---5HT1c_RATSR1CA ! ! ! ! +-----synaptophysin_RNSYN ! ! ! ! +-103 +-----GRb1_RATGARB1 +-109 ! +-86 ! ! +-101 +-----GRb3_RATGARB3 ! ! ! ! ! +------mAChR2_BOVMRM2SUB ! ! ! ! +--GRa2_(Ý) ! ! +-100 ! ! ! ! +-mGluR3_RATMGLURC ! ! ! +-85 ! +-106 +----NMDA2B_RATNMDA2B ! ! ! ! +-GRa5_(#) ! +-102 ! +----mGluR7_RNU06832 ! -110---statin_RATPS1 ! ! +-----keratin_RNKER19 ! +----5 ! +--17 +------Ins1_RNINS1 ! ! ! ! +-25 +---------CCO2_RATMTCYTOC ! ! ! ! ! +--------------Ins2_RNINS2 ! ! ! +-29 +--------nAChRa6_RATNARA6S ! ! ! ! ! ! ! +-12 +------nAChRd_RNZCRD1 ! ! ! ! ! +--4 ! ! ! ! +--9 +-------SC6_RNU19140 ! ! +------13 ! ! +----38 ! +--------GDNF_RATGDNF ! ! ! ! ! ! ! +--------SC1_RNU19135 ! ! ! ! ! ! +-----------cellubrevin_s63830 ! ! ! +--18 ! ! +--26 +---------FGFR_RATFGFR1 ! ! ! ! ! +-----------IP3R1_RATI145TR ! ! ! ! +--------nestin_RATNESTIN ! ! +-14 ! ! ! +--------IGFR1_RATIGFI ! ! ! ! ! ! +--ODC_RATODC ! ! ! +--1 ! ! ! +--2 +---IGF_II_RATGFI2 ! +-50 ! ! ! ! ! ! ! +--7 +----cyclin_B_RATCYCLNB ! ! ! ! ! ! ! ! ! +--21 +--8 +-------MK2_MUSMK ! ! ! ! ! ! ! ! ! ! ! ! ! ! +-----PDGFb_RNPDGFBCP ! ! ! ! ! +-11 +--3 ! ! ! ! ! ! ! +-----Brm_(I_I) ! ! ! ! ! ! ! ! ! ! ! ! +-16 +------TH_RATTOHA ! ! ! ! ! ! ! ! ! ! +-27 ! ! ! +------NT3_RATHDNFNT ! ! ! ! ! +-20 +---6 ! +--56 ! ! ! ! +--------PDGFR_RNPDGFRBE ! ! ! ! ! ! ! ! ! ! ! ! ! ! +-------IGFR2_MMU04710 ! ! ! ! ! ! +---10 ! ! ! +------30 ! +------cyclin_A_RATPCNA ! ! ! ! ! ! ! ! ! ! +----nAChRe_RNACRE ! ! ! ! +---15 ! ! ! ! +------trk_RATTRKPREC ! ! ! ! ! ! ! ! +--------------PTN_RATHBGAM ! ! ! +-28 ! ! ! +-----------TGFR_RATTGFBIIR ! ! ! ! ! +------------------CCO1_RATMTCYTOC ! ! ! ! +-----G67I80/86_RATGAD67 ! +-69 +-19 ! ! ! +---22 +---SC7_RNU19141 ! ! ! ! ! ! ! ! +-36 +----G67I86_RATGAD67 ! ! ! ! ! ! ! ! +-39 +-------nAChRa5_RATNACHRR ! ! ! ! ! ! ! ! ! +--------InsR_RATINSAB ! ! ! +-43 ! ! ! ! ! +------NMDA2D_RNU08260 ! ! ! ! ! +-31 ! ! ! ! ! ! +---------IP3R3_RATIP3R3X ! ! ! ! +--35 ! +-78 ! ! ! +---------BDNF_rat_BDNF_D ! ! ! ! +-45 +-32 ! ! ! ! ! ! ! +------CRAF_RATRAFA ! ! ! ! ! ! +--23 ! ! ! ! ! ! +-------H2AZ_RATHIS2AZ ! ! ! +-60 ! ! ! ! ! ! +----------CNTFR_S54212 ! ! ! ! +--37 ! ! ! ! +---------IGF_I_RATIGFIA ! +-83 ! ! ! ! ! ! +----------nAChRa4_RATNARAA ! ! ! ! ! ! ! ! +------EGFR_RATEGFR ! ! ! ! +-61 ! ! ! +-71 +-----------TCP_(I_I) ! ! ! ! ! ! ! +---------SC2_RNU19136 ! +-84 ! ! ! ! ! +------mGluR8_MMU17252 ! ! ! +--67 ! ! ! +-----nAChRa3_RNACHRAR ! ! ! ! ! ! +-----L1_S55536 ! ! ! ! ! ! ! ! +-GRa4_(§) ! ! +-82 +-68 ! +-91 ! ! +--5HT1b_RAT5HT1BR ! ! ! ! ! ! ! ! +-74 +------mGluR2_RATMGLURB ! ! ! ! +-62 ! ! ! ! +-66 +-----5HT3_MOUSE5HT3 ! ! ! ! ! ! ! +-92 ! +-72 +-----mGluR6_RATMGLUR6. ! ! ! ! ! ! ! ! ! +--------mAChR3_RATACHRMB ! ! ! ! ! ! ! +----------NFL_RATNFL ! ! ! ! ! +----NOS_RRBNOS ! +-98 ! ! ! +--GAD67_RATGAD67 ! ! ! +-90 ! ! ! +-94 +--5HT2_RATSR5HT2 ! ! ! ! ! ! ! ! ! +--GRg3_RATGABAA ! ! ! ! ! ! ! ! +------GRb2_RATGARB2 ! ! +-97 +-73 ! ! ! +--81 +-NMDA1_RNMDA ! ! ! ! ! ! ! ! +-93 +--mGluR5_RATMGLUR ! ! ! ! ! ! ! ! ! +----------nAChRa7_RATNARAD ! ! +-95 ! ! ! +---mGluR4_RATMGLUR4B ! +-107 ! +-70 ! ! ! +--79 +----NMDA2C_RATNMCA2C ! ! ! ! ! ! ! +----nAChRa2_RATNNAR ! ! ! ! ! ! +-MAP2_RATMAP2 ! ! ! +-76 ! ! ! ! +-----GRg2_(#) ! ! ! +-87 ! ! ! ! ! +--GAT1_RATGABAT ! ! ! ! ! +-63 +-108 ! ! +-75 +---------trkB_RATTRKB1 ! ! +-99 ! ! ! ! ! +-----trkC_RATTRKCN3 ! ! ! ! ! ! ! ! +-----GAD65_RATGAD65 ! +-104 ! +-88 ! ! +-89 +--pre-GAD67_RATGAD67 ! ! ! ! ! +------GRa3_RNGABAA ! ! ! +----neno_RATENONS ! +---------GAP43_RATGAP43 remember: this is an unrooted tree! Between And Length ------- --- ------ 110 109 0.00900 109 105 0.03805 105 96 0.06252 96 77 0.10136 77 64 0.07203 64 58 0.06715 58 49 0.12507 49 41 0.13743 41 40 0.02927 40 34 0.02364 34 24 0.08296 24 NFM_RATNFM 0.06192 24 NMDA2A_RATNMDA2A 0.11561 34 mGluR1_RATGPCGR 0.09243 40 DD63.2_(I_I) 0.20726 41 33 0.08320 33 NGF_RNNGFB 0.40183 33 cjun_RNRJG9 0.19380 49 cfos_RNCFOSR 0.20447 58 52 0.08008 52 44 0.09398 44 42 0.06201 42 CNTF_RNCNTF 0.36416 42 SOD_RNSODR 0.43626 44 actin_RNAC01 0.21492 52 EGF_RATEPGF 0.37763 64 55 0.09428 55 48 0.09631 48 46 0.03843 46 GFAP_RNU03700 0.14797 46 MOG_RATMOG 0.26390 48 mAChR4_RATACHRMD 0.24355 55 PDGFa_RNPDGFACP 0.51296 77 65 0.03359 65 59 0.05098 59 57 0.01724 57 54 0.04017 54 51 0.05519 51 NFH_RATNFHPEP 0.17635 51 GRg1_RNGABA 0.06398 54 53 0.04148 53 47 0.04752 47 ChAT_(*) 0.09138 47 aFGF_RNHBGF1 0.09975 53 IP3R2_RNITPR2R 0.17432 57 GRa1_(#) 0.10991 59 bFGF_RNFGFT 0.16383 65 S100_beta_RATS100B 0.13565 96 80 0.06156 80 ACHE_S50879 0.07428 80 5HT1c_RATSR1CA 0.12131 105 103 0.02926 103 synaptophysin_RNSYN 0.18790 103 101 0.03640 101 86 0.07769 86 GRb1_RATGARB1 0.19828 86 GRb3_RATGARB3 0.19385 101 mAChR2_BOVMRM2SUB 0.22247 109 106 0.02797 106 100 0.04390 100 GRa2_(Ý) 0.08578 100 85 0.04968 85 mGluR3_RATMGLURC 0.07473 85 NMDA2B_RATNMDA2B 0.17335 106 102 0.04475 102 GRa5_(#) 0.07568 102 mGluR7_RNU06832 0.15986 110 statin_RATPS1 0.13347 110 108 0.03996 108 107 0.01272 107 98 0.09120 98 92 0.08514 92 91 0.00612 91 84 0.08343 84 83 0.01793 83 78 0.04438 78 69 0.09665 69 56 0.13216 56 50 0.07338 50 38 0.18239 38 29 0.10691 29 25 0.05903 25 17 0.12644 17 5 0.15589 5 keratin_RNKER19 0.19316 5 Ins1_RNINS1 0.23788 17 CCO2_RATMTCYTOC 0.32979 25 Ins2_RNINS2 0.48387 29 13 0.23692 13 12 0.01439 12 nAChRa6_RATNARA6S 0.30014 12 9 0.04924 9 4 0.08450 4 nAChRd_RNZCRD1 0.23291 4 SC6_RNU19140 0.25401 9 GDNF_RATGDNF 0.27801 13 SC1_RNU19135 0.28666 38 26 0.11984 26 18 0.11618 18 cellubrevin_s63830 0.40179 18 FGFR_RATFGFR1 0.31307 26 IP3R1_RATI145TR 0.39786 50 30 0.24689 30 27 0.04250 27 21 0.11413 21 14 0.08620 14 nestin_RATNESTIN 0.28612 14 IGFR1_RATIGFI 0.29409 21 20 0.01388 20 16 0.05664 16 11 0.05776 11 8 0.05774 8 7 0.01209 7 2 0.07177 2 1 0.04677 1 ODC_RATODC 0.09988 1 IGF_II_RATGFI2 0.10903 2 cyclin_B_RATCYCLNB 0.16461 7 MK2_MUSMK 0.25408 8 3 0.07365 3 PDGFb_RNPDGFBCP 0.20390 3 Brm_(I_I) 0.18676 11 TH_RATTOHA 0.22726 16 6 0.12753 6 NT3_RATHDNFNT 0.22913 6 PDGFR_RNPDGFRBE 0.28062 20 10 0.14622 10 IGFR2_MMU04710 0.26260 10 cyclin_A_RATPCNA 0.21270 27 15 0.15968 15 nAChRe_RNACRE 0.17229 15 trk_RATTRKPREC 0.21052 30 28 0.03299 28 PTN_RATHBGAM 0.47910 28 TGFR_RATTGFBIIR 0.39818 56 CCO1_RATMTCYTOC 0.61661 69 60 0.10142 60 45 0.09736 45 43 0.04261 43 39 0.05762 39 36 0.04104 36 22 0.17291 22 19 0.03970 19 G67I80/86_RATGAD67 0.19648 19 SC7_RNU19141 0.11545 22 G67I86_RATGAD67 0.16114 36 nAChRa5_RATNACHRR 0.25865 39 InsR_RATINSAB 0.31004 43 35 0.10906 35 31 0.05170 31 NMDA2D_RNU08260 0.23537 31 IP3R3_RATIP3R3X 0.32331 35 32 0.05235 32 BDNF_rat_BDNF_D 0.33475 32 23 0.13130 23 CRAF_RATRAFA 0.22829 23 H2AZ_RATHIS2AZ 0.25579 45 37 0.13905 37 CNTFR_S54212 0.37276 37 IGF_I_RATIGFIA 0.32123 60 nAChRa4_RATNARAA 0.35911 78 71 0.06661 71 61 0.10400 61 EGFR_RATEGFR 0.20811 61 TCP_(I_I) 0.40662 71 SC2_RNU19136 0.31699 83 67 0.12941 67 mGluR8_MMU17252 0.21833 67 nAChRa3_RNACHRAR 0.18880 84 82 0.04439 82 L1_S55536 0.17947 82 74 0.04018 74 68 0.06974 68 GRa4_(§) 0.05578 68 5HT1b_RAT5HT1BR 0.07653 74 72 0.01970 72 66 0.08731 66 62 0.02302 62 mGluR2_RATMGLURB 0.21320 62 5HT3_MOUSE5HT3 0.19920 66 mGluR6_RATMGLUR6. 0.19693 72 mAChR3_RATACHRMB 0.27206 91 NFL_RATNFL 0.37020 92 NOS_RRBNOS 0.17289 98 97 0.01146 97 94 0.05251 94 90 0.04253 90 GAD67_RATGAD67 0.07557 90 5HT2_RATSR5HT2 0.08473 94 GRg3_RATGABAA 0.09856 97 95 0.03637 95 93 0.04751 93 81 0.11018 81 73 0.04444 73 GRb2_RATGARB2 0.24178 73 NMDA1_RNMDA 0.07436 81 mGluR5_RATMGLUR 0.09876 93 nAChRa7_RATNARAD 0.34578 95 79 0.13028 79 70 0.07196 70 mGluR4_RATMGLUR4B 0.12264 70 NMDA2C_RATNMCA2C 0.17048 79 nAChRa2_RATNNAR 0.14803 107 104 0.02825 104 99 0.03962 99 87 0.03139 87 76 0.08226 76 MAP2_RATMAP2 0.07109 76 GRg2_(#) 0.20741 87 75 0.09487 75 63 0.07700 63 GAT1_RATGABAT 0.07922 63 trkB_RATTRKB1 0.31784 75 trkC_RATTRKCN3 0.18808 99 89 0.09137 89 88 0.01183 88 GAD65_RATGAD65 0.17434 88 pre-GAD67_RATGAD67 0.09931 89 GRa3_RNGABAA 0.21325 104 neno_RATENONS 0.14896 108 GAP43_RATGAP43 0.30652